Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tgfbr3O88393 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tgfbr3O88393 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tgfbr3O88393 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
Tgfbr3O88393 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tgfbr3O88393 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.33■□□□□ 0.52
Tgfbr3O88393 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tgfbr3O88393 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Gm26524-201ENSMUST00000192339 390 ntBASIC18.32■□□□□ 0.52
Tgfbr3O88393 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tgfbr3O88393 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tgfbr3O88393 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Trmt13-210ENSMUST00000198454 880 ntBASIC18.3■□□□□ 0.52
Tgfbr3O88393 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.3■□□□□ 0.52
Tgfbr3O88393 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tgfbr3O88393 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.29■□□□□ 0.52
Tgfbr3O88393 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Gm10812-201ENSMUST00000099864 546 ntBASIC18.29■□□□□ 0.52
Tgfbr3O88393 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tgfbr3O88393 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Rab3c-203ENSMUST00000224180 967 ntBASIC18.28■□□□□ 0.52
Tgfbr3O88393 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Tgfbr3O88393 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tgfbr3O88393 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tgfbr3O88393 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.27■□□□□ 0.52
Tgfbr3O88393 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Tgfbr3O88393 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tgfbr3O88393 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.27■□□□□ 0.51
Tgfbr3O88393 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tgfbr3O88393 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.27■□□□□ 0.51
Tgfbr3O88393 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.26■□□□□ 0.51
Tgfbr3O88393 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tgfbr3O88393 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms