Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna4O70174 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna4O70174 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna4O70174 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna4O70174 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Chrna4O70174 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Chrna4O70174 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
Chrna4O70174 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Chrna4O70174 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.39■□□□□ 0.69
Chrna4O70174 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Chrna4O70174 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Chrna4O70174 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Chrna4O70174 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chrna4O70174 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Chrna4O70174 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Chrna4O70174 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.38■□□□□ 0.69
Chrna4O70174 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.38■□□□□ 0.69
Chrna4O70174 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.38■□□□□ 0.69
Chrna4O70174 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chrna4O70174 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Chrna4O70174 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chrna4O70174 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Chrna4O70174 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.37■□□□□ 0.69
Chrna4O70174 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.37■□□□□ 0.69
Chrna4O70174 Gm27801-201ENSMUST00000184174 223 ntBASIC19.37■□□□□ 0.69
Chrna4O70174 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.37■□□□□ 0.69
Chrna4O70174 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chrna4O70174 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Chrna4O70174 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna4O70174 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.36■□□□□ 0.69
Chrna4O70174 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.36■□□□□ 0.69
Chrna4O70174 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Chrna4O70174 Gm43060-201ENSMUST00000200621 289 ntBASIC19.36■□□□□ 0.69
Chrna4O70174 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.36■□□□□ 0.69
Chrna4O70174 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna4O70174 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna4O70174 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chrna4O70174 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chrna4O70174 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.35■□□□□ 0.69
Chrna4O70174 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Chrna4O70174 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chrna4O70174 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chrna4O70174 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna4O70174 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Chrna4O70174 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.34■□□□□ 0.69
Chrna4O70174 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna4O70174 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chrna4O70174 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Chrna4O70174 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Chrna4O70174 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
Chrna4O70174 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Chrna4O70174 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna4O70174 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Chrna4O70174 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.33■□□□□ 0.68
Chrna4O70174 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Chrna4O70174 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Chrna4O70174 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Chrna4O70174 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Chrna4O70174 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms