Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rdh5O55240 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rdh5O55240 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rdh5O55240 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
Rdh5O55240 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.15■□□□□ 0.5
Rdh5O55240 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.15■□□□□ 0.5
Rdh5O55240 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rdh5O55240 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Rdh5O55240 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rdh5O55240 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rdh5O55240 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
Rdh5O55240 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh5O55240 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh5O55240 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rdh5O55240 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.14■□□□□ 0.49
Rdh5O55240 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.14■□□□□ 0.49
Rdh5O55240 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rdh5O55240 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rdh5O55240 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rdh5O55240 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
Rdh5O55240 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.13■□□□□ 0.49
Rdh5O55240 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.13■□□□□ 0.49
Rdh5O55240 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Rdh5O55240 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Rdh5O55240 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rdh5O55240 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh5O55240 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh5O55240 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Rdh5O55240 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rdh5O55240 Gm8495-201ENSMUST00000188740 694 ntBASIC18.12■□□□□ 0.49
Rdh5O55240 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.12■□□□□ 0.49
Rdh5O55240 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh5O55240 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rdh5O55240 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Rdh5O55240 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Gm18284-201ENSMUST00000172604 624 ntBASIC18.11■□□□□ 0.49
Rdh5O55240 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rdh5O55240 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rdh5O55240 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.1■□□□□ 0.49
Rdh5O55240 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rdh5O55240 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rdh5O55240 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.1■□□□□ 0.49
Rdh5O55240 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rdh5O55240 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Rdh5O55240 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rdh5O55240 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rdh5O55240 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rdh5O55240 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Rdh5O55240 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.09■□□□□ 0.49
Rdh5O55240 Gm26833-201ENSMUST00000180899 440 ntBASIC18.09■□□□□ 0.49
Rdh5O55240 Gm40848-201ENSMUST00000221998 324 ntBASIC18.09■□□□□ 0.49
Rdh5O55240 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rdh5O55240 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rdh5O55240 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rdh5O55240 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rdh5O55240 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rdh5O55240 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.08■□□□□ 0.48
Rdh5O55240 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rdh5O55240 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Rdh5O55240 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms