Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm43137-201ENSMUST00000198052 594 ntBASIC19.38■□□□□ 0.69
ChkaO54804 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.38■□□□□ 0.69
ChkaO54804 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.38■□□□□ 0.69
ChkaO54804 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ChkaO54804 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ChkaO54804 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ChkaO54804 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ChkaO54804 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ChkaO54804 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.37■□□□□ 0.69
ChkaO54804 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.37■□□□□ 0.69
ChkaO54804 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ChkaO54804 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ChkaO54804 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ChkaO54804 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Gm12251-201ENSMUST00000117893 792 ntBASIC19.36■□□□□ 0.69
ChkaO54804 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ChkaO54804 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.36■□□□□ 0.69
ChkaO54804 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.36■□□□□ 0.69
ChkaO54804 Spcs1-204ENSMUST00000226782 949 ntBASIC19.36■□□□□ 0.69
ChkaO54804 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ChkaO54804 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.36■□□□□ 0.69
ChkaO54804 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.36■□□□□ 0.69
ChkaO54804 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
ChkaO54804 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ChkaO54804 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.35■□□□□ 0.69
ChkaO54804 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
ChkaO54804 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.34■□□□□ 0.69
ChkaO54804 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ChkaO54804 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
ChkaO54804 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkaO54804 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkaO54804 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ChkaO54804 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ChkaO54804 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ChkaO54804 BC021767-201ENSMUST00000126387 1716 ntBASIC19.33■□□□□ 0.68
ChkaO54804 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
ChkaO54804 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ChkaO54804 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ChkaO54804 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ChkaO54804 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.32■□□□□ 0.68
ChkaO54804 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ChkaO54804 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
ChkaO54804 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ChkaO54804 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ChkaO54804 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.31■□□□□ 0.68
ChkaO54804 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.31■□□□□ 0.68
ChkaO54804 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ChkaO54804 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms