Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sdc4O35988 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Sdc4O35988 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sdc4O35988 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.81■□□□□ 0.76
Sdc4O35988 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sdc4O35988 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sdc4O35988 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc4O35988 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc4O35988 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc4O35988 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc4O35988 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.8■□□□□ 0.76
Sdc4O35988 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sdc4O35988 Gm12933-201ENSMUST00000120203 872 ntBASIC19.8■□□□□ 0.76
Sdc4O35988 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.8■□□□□ 0.76
Sdc4O35988 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc4O35988 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sdc4O35988 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc4O35988 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc4O35988 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.79■□□□□ 0.76
Sdc4O35988 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.79■□□□□ 0.76
Sdc4O35988 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.79■□□□□ 0.76
Sdc4O35988 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.79■□□□□ 0.76
Sdc4O35988 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc4O35988 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.79■□□□□ 0.76
Sdc4O35988 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc4O35988 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sdc4O35988 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.78■□□□□ 0.76
Sdc4O35988 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Sdc4O35988 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.78■□□□□ 0.76
Sdc4O35988 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 Gm10602-201ENSMUST00000098239 609 ntBASIC19.78■□□□□ 0.76
Sdc4O35988 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Sdc4O35988 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sdc4O35988 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc4O35988 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc4O35988 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Sdc4O35988 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sdc4O35988 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Sdc4O35988 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc4O35988 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.77■□□□□ 0.76
Sdc4O35988 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sdc4O35988 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sdc4O35988 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sdc4O35988 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.76■□□□□ 0.75
Sdc4O35988 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Sdc4O35988 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sdc4O35988 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Sdc4O35988 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sdc4O35988 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc4O35988 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Sdc4O35988 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.75■□□□□ 0.75
Sdc4O35988 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc4O35988 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Sdc4O35988 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.75■□□□□ 0.75
Sdc4O35988 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.74■□□□□ 0.75
Sdc4O35988 Gm7860-201ENSMUST00000121190 879 ntBASIC19.74■□□□□ 0.75
Sdc4O35988 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Sdc4O35988 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Sdc4O35988 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sdc4O35988 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sdc4O35988 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sdc4O35988 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.74■□□□□ 0.75
Sdc4O35988 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sdc4O35988 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Sdc4O35988 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sdc4O35988 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Sdc4O35988 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sdc4O35988 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms