Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sptlc1O35704 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sptlc1O35704 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sptlc1O35704 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Gm6211-202ENSMUST00000167849 925 ntBASIC21.04■□□□□ 0.96
Sptlc1O35704 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.04■□□□□ 0.96
Sptlc1O35704 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.04■□□□□ 0.96
Sptlc1O35704 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sptlc1O35704 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sptlc1O35704 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sptlc1O35704 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sptlc1O35704 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sptlc1O35704 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sptlc1O35704 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sptlc1O35704 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sptlc1O35704 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.02■□□□□ 0.96
Sptlc1O35704 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Sptlc1O35704 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
Sptlc1O35704 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sptlc1O35704 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Gm5408-201ENSMUST00000197998 747 ntBASIC21.01■□□□□ 0.95
Sptlc1O35704 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Sptlc1O35704 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.01■□□□□ 0.95
Sptlc1O35704 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sptlc1O35704 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sptlc1O35704 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Sptlc1O35704 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Sptlc1O35704 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Sptlc1O35704 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21■□□□□ 0.95
Sptlc1O35704 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21■□□□□ 0.95
Sptlc1O35704 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sptlc1O35704 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Sptlc1O35704 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sptlc1O35704 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sptlc1O35704 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.99■□□□□ 0.95
Sptlc1O35704 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sptlc1O35704 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.99■□□□□ 0.95
Sptlc1O35704 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sptlc1O35704 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Sptlc1O35704 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sptlc1O35704 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.98■□□□□ 0.95
Sptlc1O35704 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sptlc1O35704 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Sptlc1O35704 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sptlc1O35704 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.97■□□□□ 0.95
Sptlc1O35704 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.97■□□□□ 0.95
Sptlc1O35704 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Sptlc1O35704 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sptlc1O35704 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sptlc1O35704 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.96■□□□□ 0.95
Sptlc1O35704 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.96■□□□□ 0.95
Sptlc1O35704 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sptlc1O35704 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
Sptlc1O35704 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sptlc1O35704 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 252.8 ms