Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc2O08811 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc2O08811 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.68■□□□□ 0.74
Ercc2O08811 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ercc2O08811 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ercc2O08811 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.68■□□□□ 0.74
Ercc2O08811 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ercc2O08811 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ercc2O08811 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc2O08811 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc2O08811 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Ercc2O08811 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc2O08811 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ercc2O08811 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ercc2O08811 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Ercc2O08811 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
Ercc2O08811 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Ercc2O08811 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ercc2O08811 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ercc2O08811 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.65■□□□□ 0.74
Ercc2O08811 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.65■□□□□ 0.74
Ercc2O08811 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.65■□□□□ 0.74
Ercc2O08811 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.65■□□□□ 0.74
Ercc2O08811 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.65■□□□□ 0.74
Ercc2O08811 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ercc2O08811 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.65■□□□□ 0.74
Ercc2O08811 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ercc2O08811 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ercc2O08811 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ercc2O08811 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ercc2O08811 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ercc2O08811 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ercc2O08811 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ercc2O08811 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Ercc2O08811 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Ercc2O08811 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ercc2O08811 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.63■□□□□ 0.73
Ercc2O08811 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.63■□□□□ 0.73
Ercc2O08811 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ercc2O08811 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.62■□□□□ 0.73
Ercc2O08811 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ercc2O08811 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.62■□□□□ 0.73
Ercc2O08811 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.62■□□□□ 0.73
Ercc2O08811 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.62■□□□□ 0.73
Ercc2O08811 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.62■□□□□ 0.73
Ercc2O08811 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.62■□□□□ 0.73
Ercc2O08811 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ercc2O08811 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc2O08811 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc2O08811 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc2O08811 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc2O08811 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ercc2O08811 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Ercc2O08811 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ercc2O08811 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ercc2O08811 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ercc2O08811 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc2O08811 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc2O08811 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc2O08811 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.6■□□□□ 0.73
Ercc2O08811 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc2O08811 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ercc2O08811 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms