Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Sh3yl1O08641 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Gm43060-201ENSMUST00000200621 289 ntBASIC18.23■□□□□ 0.51
Sh3yl1O08641 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3yl1O08641 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Golph3-205ENSMUST00000228671 2842 ntBASIC18.22■□□□□ 0.51
Sh3yl1O08641 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.22■□□□□ 0.51
Sh3yl1O08641 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sh3yl1O08641 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sh3yl1O08641 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Sh3yl1O08641 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.21■□□□□ 0.5
Sh3yl1O08641 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Gm11421-201ENSMUST00000122124 294 ntBASIC18.2■□□□□ 0.5
Sh3yl1O08641 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3yl1O08641 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3yl1O08641 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3yl1O08641 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Sh3yl1O08641 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3yl1O08641 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3yl1O08641 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.16■□□□□ 0.5
Sh3yl1O08641 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Sh3yl1O08641 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms