Protein–RNA interactions for Protein: J3QP37

Smim22, MCG1038270, isoform CRA_a, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim22J3QP37 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Smim22J3QP37 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Smim22J3QP37 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.24■□□□□ 0.67
Smim22J3QP37 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim22J3QP37 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Smim22J3QP37 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Smim22J3QP37 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim22J3QP37 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Smim22J3QP37 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.22■□□□□ 0.67
Smim22J3QP37 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim22J3QP37 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Smim22J3QP37 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Smim22J3QP37 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.21■□□□□ 0.67
Smim22J3QP37 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Smim22J3QP37 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.21■□□□□ 0.67
Smim22J3QP37 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim22J3QP37 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim22J3QP37 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Smim22J3QP37 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Smim22J3QP37 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Smim22J3QP37 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Smim22J3QP37 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Gm10013-201ENSMUST00000106074 672 ntBASIC19.19■□□□□ 0.66
Smim22J3QP37 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.19■□□□□ 0.66
Smim22J3QP37 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.19■□□□□ 0.66
Smim22J3QP37 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.19■□□□□ 0.66
Smim22J3QP37 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Smim22J3QP37 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim22J3QP37 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Smim22J3QP37 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Smim22J3QP37 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Gm7153-201ENSMUST00000117092 455 ntBASIC19.18■□□□□ 0.66
Smim22J3QP37 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.18■□□□□ 0.66
Smim22J3QP37 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim22J3QP37 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Smim22J3QP37 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC19.18■□□□□ 0.66
Smim22J3QP37 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Smim22J3QP37 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim22J3QP37 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim22J3QP37 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim22J3QP37 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim22J3QP37 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.17■□□□□ 0.66
Smim22J3QP37 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.17■□□□□ 0.66
Smim22J3QP37 Dio3-201ENSMUST00000097228 1449 ntBASIC19.17■□□□□ 0.66
Smim22J3QP37 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.16■□□□□ 0.66
Smim22J3QP37 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim22J3QP37 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim22J3QP37 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Smim22J3QP37 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim22J3QP37 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Smim22J3QP37 Gm30025-201ENSMUST00000218555 728 ntBASIC19.16■□□□□ 0.66
Smim22J3QP37 Gm5186-201ENSMUST00000218781 920 ntBASIC19.16■□□□□ 0.66
Smim22J3QP37 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Smim22J3QP37 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Smim22J3QP37 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.15■□□□□ 0.66
Smim22J3QP37 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.15■□□□□ 0.66
Smim22J3QP37 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Smim22J3QP37 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Smim22J3QP37 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms