Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Gm11539-201ENSMUST00000119837 557 ntBASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Gm13436-201ENSMUST00000120418 567 ntBASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Ank2-226ENSMUST00000189368 339 ntBASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc188F6WEU2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc188F6WEU2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Gm23634-201ENSMUST00000175071 91 ntBASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Gm6345-202ENSMUST00000180900 204 ntBASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc188F6WEU2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Gm33142-201ENSMUST00000193913 867 ntBASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc188F6WEU2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc188F6WEU2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 AC133598.3-202ENSMUST00000224219 531 ntBASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc188F6WEU2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ccdc188F6WEU2 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc188F6WEU2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc188F6WEU2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Gm7860-201ENSMUST00000121190 879 ntBASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Gm5867-201ENSMUST00000063197 592 ntBASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc188F6WEU2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms