Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sptbn4E9PX29 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sptbn4E9PX29 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sptbn4E9PX29 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.52■□□□□ 0.39
Sptbn4E9PX29 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sptbn4E9PX29 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Sptbn4E9PX29 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Sptbn4E9PX29 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Gm10013-201ENSMUST00000106074 672 ntBASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Sptbn4E9PX29 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sptbn4E9PX29 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Gm33142-201ENSMUST00000193913 867 ntBASIC17.48■□□□□ 0.39
Sptbn4E9PX29 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Gm6345-202ENSMUST00000180900 204 ntBASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.48■□□□□ 0.39
Sptbn4E9PX29 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gm13559-201ENSMUST00000120476 863 ntBASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn4E9PX29 Gm9103-201ENSMUST00000119371 405 ntBASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn4E9PX29 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sptbn4E9PX29 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Gm30025-201ENSMUST00000218555 728 ntBASIC17.45■□□□□ 0.38
Sptbn4E9PX29 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn4E9PX29 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Gm11539-201ENSMUST00000119837 557 ntBASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Gm13436-201ENSMUST00000120418 567 ntBASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Gm44549-201ENSMUST00000208351 577 ntBASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn4E9PX29 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.43■□□□□ 0.38
Sptbn4E9PX29 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Sptbn4E9PX29 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.43■□□□□ 0.38
Sptbn4E9PX29 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sptbn4E9PX29 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms