Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.27■□□□□ 0.68
Rrn3B2RS91 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrn3B2RS91 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rrn3B2RS91 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.27■□□□□ 0.68
Rrn3B2RS91 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrn3B2RS91 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrn3B2RS91 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rrn3B2RS91 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rrn3B2RS91 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrn3B2RS91 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rrn3B2RS91 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.26■□□□□ 0.67
Rrn3B2RS91 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.26■□□□□ 0.67
Rrn3B2RS91 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.26■□□□□ 0.67
Rrn3B2RS91 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rrn3B2RS91 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.24■□□□□ 0.67
Rrn3B2RS91 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.24■□□□□ 0.67
Rrn3B2RS91 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rrn3B2RS91 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.24■□□□□ 0.67
Rrn3B2RS91 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rrn3B2RS91 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.22■□□□□ 0.67
Rrn3B2RS91 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.22■□□□□ 0.67
Rrn3B2RS91 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.22■□□□□ 0.67
Rrn3B2RS91 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rrn3B2RS91 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rrn3B2RS91 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.2■□□□□ 0.66
Rrn3B2RS91 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rrn3B2RS91 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rrn3B2RS91 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms