Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ccdc9bA3KGF9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Gm43530-201ENSMUST00000195920 274 ntBASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ccdc9bA3KGF9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ccdc9bA3KGF9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc9bA3KGF9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc9bA3KGF9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccdc9bA3KGF9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccdc9bA3KGF9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Gm12933-201ENSMUST00000120203 872 ntBASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Mir6236-201ENSMUST00000184437 123 ntBASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ccdc9bA3KGF9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccdc9bA3KGF9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccdc9bA3KGF9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
Ccdc9bA3KGF9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9bA3KGF9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc9bA3KGF9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc9bA3KGF9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms