Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Gm13148-201ENSMUST00000118892 745 ntBASIC20.29■□□□□ 0.84
Scn1aA2APX8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Scn1aA2APX8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.29■□□□□ 0.84
Scn1aA2APX8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Scn1aA2APX8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.28■□□□□ 0.84
Scn1aA2APX8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Gm6420-201ENSMUST00000193885 723 ntBASIC20.27■□□□□ 0.84
Scn1aA2APX8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Scn1aA2APX8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.26■□□□□ 0.83
Scn1aA2APX8 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scn1aA2APX8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.26■□□□□ 0.83
Scn1aA2APX8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn1aA2APX8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn1aA2APX8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn1aA2APX8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scn1aA2APX8 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Scn1aA2APX8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Scn1aA2APX8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.24■□□□□ 0.83
Scn1aA2APX8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Scn1aA2APX8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Nespas-201ENSMUST00000143738 1083 ntBASIC20.23■□□□□ 0.83
Scn1aA2APX8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scn1aA2APX8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scn1aA2APX8 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scn1aA2APX8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.21■□□□□ 0.83
Scn1aA2APX8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scn1aA2APX8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Scn1aA2APX8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.2■□□□□ 0.83
Scn1aA2APX8 Gm12933-201ENSMUST00000120203 872 ntBASIC20.2■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms