Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trbv19A0A0B4J1H4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Golph3-205ENSMUST00000228671 2842 ntBASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trbv19A0A0B4J1H4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trbv19A0A0B4J1H4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm43137-201ENSMUST00000198052 594 ntBASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 AC124603.1-201ENSMUST00000223843 308 ntBASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Spcs1-204ENSMUST00000226782 949 ntBASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trbv19A0A0B4J1H4 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.34■□□□□ 0.05
Trbv19A0A0B4J1H4 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv19A0A0B4J1H4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv19A0A0B4J1H4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv19A0A0B4J1H4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trbv19A0A0B4J1H4 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trbv19A0A0B4J1H4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms