Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.44■□□□□ 0.06
Trav6-1A0A075B5Z8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav6-1A0A075B5Z8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.42■□□□□ 0.06
Trav6-1A0A075B5Z8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav6-1A0A075B5Z8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav6-1A0A075B5Z8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav6-1A0A075B5Z8 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav6-1A0A075B5Z8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav6-1A0A075B5Z8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.36■□□□□ 0.05
Trav6-1A0A075B5Z8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav6-1A0A075B5Z8 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.36■□□□□ 0.05
Trav6-1A0A075B5Z8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-1A0A075B5Z8 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav6-1A0A075B5Z8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms