Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav1A0A075B5Z4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav1A0A075B5Z4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav1A0A075B5Z4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Trav1A0A075B5Z4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav1A0A075B5Z4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav1A0A075B5Z4 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav1A0A075B5Z4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trav1A0A075B5Z4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav1A0A075B5Z4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav1A0A075B5Z4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Smad6-203ENSMUST00000179458 273 ntBASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav1A0A075B5Z4 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav1A0A075B5Z4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms