Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb3S4R1G7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb3S4R1G7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb3S4R1G7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb3S4R1G7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
H2afb3S4R1G7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Golgb1-201ENSMUST00000023534 498 ntBASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
H2afb3S4R1G7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Gm12922-201ENSMUST00000120626 809 ntBASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
H2afb3S4R1G7 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
H2afb3S4R1G7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H2afb3S4R1G7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H2afb3S4R1G7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms