Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cx3cr1Q9Z0D9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 AA386476-201ENSMUST00000098781 1665 ntBASIC16.3■□□□□ 0.2
Cx3cr1Q9Z0D9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cx3cr1Q9Z0D9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 BC021767-201ENSMUST00000126387 1716 ntBASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cx3cr1Q9Z0D9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Gm9870-201ENSMUST00000063874 645 ntBASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cx3cr1Q9Z0D9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.19
Cx3cr1Q9Z0D9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Cx3cr1Q9Z0D9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cr1Q9Z0D9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cx3cr1Q9Z0D9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cx3cr1Q9Z0D9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms