Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.78■□□□□ 0.28
Nubp1Q9R060 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.78■□□□□ 0.28
Nubp1Q9R060 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nubp1Q9R060 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Gm37856-201ENSMUST00000191634 999 ntBASIC16.77■□□□□ 0.28
Nubp1Q9R060 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nubp1Q9R060 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp1Q9R060 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp1Q9R060 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp1Q9R060 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp1Q9R060 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nubp1Q9R060 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.76■□□□□ 0.27
Nubp1Q9R060 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Gm13836-201ENSMUST00000121159 501 ntBASIC16.76■□□□□ 0.27
Nubp1Q9R060 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nubp1Q9R060 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.75■□□□□ 0.27
Nubp1Q9R060 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Gm6211-202ENSMUST00000167849 925 ntBASIC16.75■□□□□ 0.27
Nubp1Q9R060 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nubp1Q9R060 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Trmt13-210ENSMUST00000198454 880 ntBASIC16.74■□□□□ 0.27
Nubp1Q9R060 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.74■□□□□ 0.27
Nubp1Q9R060 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nubp1Q9R060 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.74■□□□□ 0.27
Nubp1Q9R060 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nubp1Q9R060 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.73■□□□□ 0.27
Nubp1Q9R060 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.73■□□□□ 0.27
Nubp1Q9R060 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nubp1Q9R060 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.72■□□□□ 0.27
Nubp1Q9R060 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.72■□□□□ 0.27
Nubp1Q9R060 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nubp1Q9R060 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.71■□□□□ 0.27
Nubp1Q9R060 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nubp1Q9R060 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms