Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a2Q9JLR1 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sec61a2Q9JLR1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sec61a2Q9JLR1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Gm15039-201ENSMUST00000118914 875 ntBASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sec61a2Q9JLR1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Gm12251-201ENSMUST00000117893 792 ntBASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.29■□□□□ 0.36
Sec61a2Q9JLR1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sec61a2Q9JLR1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.27■□□□□ 0.36
Sec61a2Q9JLR1 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a2Q9JLR1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sec61a2Q9JLR1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Mir7075-201ENSMUST00000184187 82 ntBASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sec61a2Q9JLR1 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sec61a2Q9JLR1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms