Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tubb3Q9ERD7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tubb3Q9ERD7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Tubb3Q9ERD7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Tubb3Q9ERD7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Tubb3Q9ERD7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Tubb3Q9ERD7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Tubb3Q9ERD7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Tubb3Q9ERD7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms