Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Vps35Q9EQH3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.25■□□□□ 0.67
Vps35Q9EQH3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Gm43060-201ENSMUST00000200621 289 ntBASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Gm40848-201ENSMUST00000221998 324 ntBASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vps35Q9EQH3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vps35Q9EQH3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vps35Q9EQH3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vps35Q9EQH3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vps35Q9EQH3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.19■□□□□ 0.66
Vps35Q9EQH3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Vps35Q9EQH3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 141.1 ms