Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a1Q9EPE9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.91■□□□□ 0.94
Atp13a1Q9EPE9 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a1Q9EPE9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Atp13a1Q9EPE9 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Gm13146-201ENSMUST00000118508 780 ntBASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Atp13a1Q9EPE9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Atp13a1Q9EPE9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Gm29257-201ENSMUST00000186115 639 ntBASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Atp13a1Q9EPE9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.87■□□□□ 0.93
Atp13a1Q9EPE9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Atp13a1Q9EPE9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Atp13a1Q9EPE9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Gm7860-201ENSMUST00000121190 879 ntBASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Atp13a1Q9EPE9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Atp13a1Q9EPE9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.83■□□□□ 0.92
Atp13a1Q9EPE9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Atp13a1Q9EPE9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Atp13a1Q9EPE9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Atp13a1Q9EPE9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Atp13a1Q9EPE9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a1Q9EPE9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Atp13a1Q9EPE9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Atp13a1Q9EPE9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.8■□□□□ 0.92
Atp13a1Q9EPE9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms