Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp2aQ9DB34 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp2aQ9DB34 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chmp2aQ9DB34 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Chmp2aQ9DB34 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chmp2aQ9DB34 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2aQ9DB34 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2aQ9DB34 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2aQ9DB34 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp2aQ9DB34 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp2aQ9DB34 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Chmp2aQ9DB34 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp2aQ9DB34 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp2aQ9DB34 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.02■□□□□ 0.79
Chmp2aQ9DB34 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2aQ9DB34 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp2aQ9DB34 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp2aQ9DB34 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms