Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ssmem1Q9D9Y8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ssmem1Q9D9Y8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ssmem1Q9D9Y8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Gm42778-201ENSMUST00000199644 553 ntBASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Gm9988-201ENSMUST00000069786 435 ntBASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssmem1Q9D9Y8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssmem1Q9D9Y8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Gm42642-201ENSMUST00000200683 355 ntBASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssmem1Q9D9Y8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssmem1Q9D9Y8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Gm18671-201ENSMUST00000214826 683 ntBASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ssmem1Q9D9Y8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms