Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm3404Q9D506 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.47■□□□□ 0.87
Gm3404Q9D506 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3404Q9D506 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3404Q9D506 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Gm3404Q9D506 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Gm3404Q9D506 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3404Q9D506 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.45■□□□□ 0.86
Gm3404Q9D506 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3404Q9D506 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3404Q9D506 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3404Q9D506 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3404Q9D506 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.42■□□□□ 0.86
Gm3404Q9D506 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3404Q9D506 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Gm3404Q9D506 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Gm3404Q9D506 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gm3404Q9D506 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.4■□□□□ 0.86
Gm3404Q9D506 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3404Q9D506 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3404Q9D506 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Gm3404Q9D506 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3404Q9D506 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3404Q9D506 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3404Q9D506 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3404Q9D506 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Gm27801-201ENSMUST00000184174 223 ntBASIC20.39■□□□□ 0.85
Gm3404Q9D506 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gm3404Q9D506 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Gm3404Q9D506 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3404Q9D506 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms