Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Gm45417-201ENSMUST00000209533 758 ntBASIC18.76■□□□□ 0.59
Trim16Q99PP9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trim16Q99PP9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.74■□□□□ 0.59
Trim16Q99PP9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.73■□□□□ 0.59
Trim16Q99PP9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trim16Q99PP9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.71■□□□□ 0.59
Trim16Q99PP9 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Gm12251-201ENSMUST00000117893 792 ntBASIC18.71■□□□□ 0.59
Trim16Q99PP9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trim16Q99PP9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trim16Q99PP9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Mir7075-201ENSMUST00000184187 82 ntBASIC18.7■□□□□ 0.58
Trim16Q99PP9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Trim16Q99PP9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms