Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh4Q99MT2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh4Q99MT2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.72■□□□□ 0.59
Msh4Q99MT2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh4Q99MT2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.71■□□□□ 0.59
Msh4Q99MT2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh4Q99MT2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Msh4Q99MT2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Gm26833-201ENSMUST00000180899 440 ntBASIC18.69■□□□□ 0.58
Msh4Q99MT2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Msh4Q99MT2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Msh4Q99MT2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Msh4Q99MT2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.66■□□□□ 0.58
Msh4Q99MT2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Smad6-203ENSMUST00000179458 273 ntBASIC18.66■□□□□ 0.58
Msh4Q99MT2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Msh4Q99MT2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.66■□□□□ 0.58
Msh4Q99MT2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms