Protein–RNA interactions for Protein: Q99JH7

Clstn3, Calsyntenin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn3Q99JH7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Clstn3Q99JH7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Clstn3Q99JH7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Gm37856-201ENSMUST00000191634 999 ntBASIC20.65■□□□□ 0.9
Clstn3Q99JH7 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clstn3Q99JH7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Gm13168-201ENSMUST00000121771 632 ntBASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.64■□□□□ 0.89
Clstn3Q99JH7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Gm26524-201ENSMUST00000192339 390 ntBASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Gm10252-201ENSMUST00000209541 832 ntBASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Clstn3Q99JH7 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clstn3Q99JH7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Clstn3Q99JH7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Clstn3Q99JH7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clstn3Q99JH7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Clstn3Q99JH7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.59■□□□□ 0.89
Clstn3Q99JH7 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms