Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Gm10232-201ENSMUST00000089221 720 ntBASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgc3Q91XX1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Gm13238-201ENSMUST00000117655 780 ntBASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgc3Q91XX1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Gm7143-201ENSMUST00000222811 859 ntBASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.16■□□□□ 0.5
Pcdhgc3Q91XX1 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhgc3Q91XX1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhgc3Q91XX1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhgc3Q91XX1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhgc3Q91XX1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhgc3Q91XX1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhgc3Q91XX1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms