Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Trex1Q91XB0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trex1Q91XB0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trex1Q91XB0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Trex1Q91XB0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Trex1Q91XB0 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trex1Q91XB0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trex1Q91XB0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Gm6211-202ENSMUST00000167849 925 ntBASIC22.21■■□□□ 1.15
Trex1Q91XB0 Gm5408-201ENSMUST00000197998 747 ntBASIC22.21■■□□□ 1.15
Trex1Q91XB0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trex1Q91XB0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Gm12527-201ENSMUST00000117967 564 ntBASIC22.2■■□□□ 1.14
Trex1Q91XB0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trex1Q91XB0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trex1Q91XB0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trex1Q91XB0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trex1Q91XB0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.19■■□□□ 1.14
Trex1Q91XB0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trex1Q91XB0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.19■■□□□ 1.14
Trex1Q91XB0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Trex1Q91XB0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trex1Q91XB0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.18■■□□□ 1.14
Trex1Q91XB0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trex1Q91XB0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trex1Q91XB0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trex1Q91XB0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trex1Q91XB0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trex1Q91XB0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trex1Q91XB0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trex1Q91XB0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trex1Q91XB0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Trex1Q91XB0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.15■■□□□ 1.14
Trex1Q91XB0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Trex1Q91XB0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trex1Q91XB0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trex1Q91XB0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.14■■□□□ 1.13
Trex1Q91XB0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trex1Q91XB0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.14■■□□□ 1.13
Trex1Q91XB0 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trex1Q91XB0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trex1Q91XB0 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trex1Q91XB0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms