Protein–RNA interactions for Protein: Q8VIK1

Snrnp25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp25Q8VIK1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Snrnp25Q8VIK1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Snrnp25Q8VIK1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Snrnp25Q8VIK1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Snrnp25Q8VIK1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Snrnp25Q8VIK1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snrnp25Q8VIK1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.26■□□□□ 0.83
Snrnp25Q8VIK1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Snrnp25Q8VIK1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Notumos-201ENSMUST00000151998 2659 ntBASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Snrnp25Q8VIK1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Golph3-202ENSMUST00000226517 2359 ntBASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Snrnp25Q8VIK1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Snrnp25Q8VIK1 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.22■□□□□ 0.83
Snrnp25Q8VIK1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Snrnp25Q8VIK1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Snrnp25Q8VIK1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Snrnp25Q8VIK1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Gm18284-201ENSMUST00000172604 624 ntBASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Snrnp25Q8VIK1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms