Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdhr1Q8VHP6 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cdhr1Q8VHP6 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdhr1Q8VHP6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdhr1Q8VHP6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.82■□□□□ 0.6
Cdhr1Q8VHP6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdhr1Q8VHP6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Gm13146-201ENSMUST00000118508 780 ntBASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdhr1Q8VHP6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdhr1Q8VHP6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Gm27011-201ENSMUST00000182352 972 ntBASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdhr1Q8VHP6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdhr1Q8VHP6 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cdhr1Q8VHP6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cdhr1Q8VHP6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cdhr1Q8VHP6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cdhr1Q8VHP6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cdhr1Q8VHP6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms