Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Gm37179-201ENSMUST00000194862 823 ntBASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sh3kbp1Q8R550 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Gm10033-202ENSMUST00000211874 928 ntBASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sh3kbp1Q8R550 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Sh3kbp1Q8R550 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3kbp1Q8R550 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Sh3kbp1Q8R550 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sh3kbp1Q8R550 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sh3kbp1Q8R550 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Gm18671-201ENSMUST00000214826 683 ntBASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sh3kbp1Q8R550 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.84■□□□□ 0.77
Sh3kbp1Q8R550 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sh3kbp1Q8R550 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sh3kbp1Q8R550 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 AV356131-201ENSMUST00000206201 750 ntBASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Sh3kbp1Q8R550 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sh3kbp1Q8R550 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Gm42778-201ENSMUST00000199644 553 ntBASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sh3kbp1Q8R550 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms