Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Vmn1r28Q8R2C9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Vmn1r28Q8R2C9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vmn1r28Q8R2C9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Vmn1r28Q8R2C9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Vmn1r28Q8R2C9 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Vmn1r28Q8R2C9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Gm9988-201ENSMUST00000069786 435 ntBASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Gm5874-201ENSMUST00000096101 508 ntBASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Vmn1r28Q8R2C9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Gm18284-201ENSMUST00000172604 624 ntBASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Vmn1r28Q8R2C9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Gm10493-201ENSMUST00000097270 612 ntBASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Vmn1r28Q8R2C9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Vmn1r28Q8R2C9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Vmn1r28Q8R2C9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r28Q8R2C9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Vmn1r28Q8R2C9 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vmn1r28Q8R2C9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms