Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Sf3a1Q8K4Z5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Sf3a1Q8K4Z5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Sf3a1Q8K4Z5 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Sf3a1Q8K4Z5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Sf3a1Q8K4Z5 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Sf3a1Q8K4Z5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Sf3a1Q8K4Z5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Iqck-206ENSMUST00000208658 2891 ntBASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Sf3a1Q8K4Z5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Sf3a1Q8K4Z5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Sf3a1Q8K4Z5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sf3a1Q8K4Z5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sf3a1Q8K4Z5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Sf3a1Q8K4Z5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Sf3a1Q8K4Z5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms