Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Gm37856-201ENSMUST00000191634 999 ntBASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC21.38■■□□□ 1.01
PdgfcQ8CI19 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.38■■□□□ 1.01
PdgfcQ8CI19 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PdgfcQ8CI19 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Gm13168-201ENSMUST00000121771 632 ntBASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PdgfcQ8CI19 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PdgfcQ8CI19 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
PdgfcQ8CI19 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.34■■□□□ 1.01
PdgfcQ8CI19 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PdgfcQ8CI19 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.34■■□□□ 1.01
PdgfcQ8CI19 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PdgfcQ8CI19 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.33■■□□□ 1
PdgfcQ8CI19 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.33■■□□□ 1
PdgfcQ8CI19 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PdgfcQ8CI19 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.32■■□□□ 1
PdgfcQ8CI19 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PdgfcQ8CI19 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PdgfcQ8CI19 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.32■■□□□ 1
PdgfcQ8CI19 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.31■■□□□ 1
PdgfcQ8CI19 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.31■■□□□ 1
PdgfcQ8CI19 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.31■■□□□ 1
PdgfcQ8CI19 Gm26524-201ENSMUST00000192339 390 ntBASIC21.31■■□□□ 1
PdgfcQ8CI19 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
PdgfcQ8CI19 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.31■■□□□ 1
PdgfcQ8CI19 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PdgfcQ8CI19 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.31■■□□□ 1
PdgfcQ8CI19 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.3■■□□□ 1
PdgfcQ8CI19 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.3■■□□□ 1
PdgfcQ8CI19 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.3■■□□□ 1
PdgfcQ8CI19 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PdgfcQ8CI19 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.29■■□□□ 1
PdgfcQ8CI19 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PdgfcQ8CI19 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PdgfcQ8CI19 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms