Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Gm13146-201ENSMUST00000118508 780 ntBASIC23.82■■□□□ 1.4
Smc4Q8CG47 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Gm38205-201ENSMUST00000192243 258 ntBASIC23.82■■□□□ 1.4
Smc4Q8CG47 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.82■■□□□ 1.4
Smc4Q8CG47 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Smc4Q8CG47 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.81■■□□□ 1.4
Smc4Q8CG47 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc4Q8CG47 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.81■■□□□ 1.4
Smc4Q8CG47 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc4Q8CG47 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc4Q8CG47 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Smc4Q8CG47 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Smc4Q8CG47 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.8■■□□□ 1.4
Smc4Q8CG47 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Smc4Q8CG47 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC23.79■■□□□ 1.4
Smc4Q8CG47 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc4Q8CG47 Gm29257-201ENSMUST00000186115 639 ntBASIC23.79■■□□□ 1.4
Smc4Q8CG47 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc4Q8CG47 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.79■■□□□ 1.4
Smc4Q8CG47 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Smc4Q8CG47 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.78■■□□□ 1.4
Smc4Q8CG47 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Smc4Q8CG47 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc4Q8CG47 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc4Q8CG47 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc4Q8CG47 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Smc4Q8CG47 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.76■■□□□ 1.39
Smc4Q8CG47 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Smc4Q8CG47 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Smc4Q8CG47 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc4Q8CG47 Gm12933-201ENSMUST00000120203 872 ntBASIC23.74■■□□□ 1.39
Smc4Q8CG47 Gm7860-201ENSMUST00000121190 879 ntBASIC23.74■■□□□ 1.39
Smc4Q8CG47 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Smc4Q8CG47 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Smc4Q8CG47 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc4Q8CG47 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Gm20100-201ENSMUST00000209418 2272 ntBASIC23.72■■□□□ 1.39
Smc4Q8CG47 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Smc4Q8CG47 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Gm10602-201ENSMUST00000098239 609 ntBASIC23.71■■□□□ 1.39
Smc4Q8CG47 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Smc4Q8CG47 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms