Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Polr2bQ8CFI7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Polr2bQ8CFI7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Polr2bQ8CFI7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Polr2bQ8CFI7 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Gm9988-201ENSMUST00000069786 435 ntBASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Polr2bQ8CFI7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Polr2bQ8CFI7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Polr2bQ8CFI7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Polr2bQ8CFI7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Polr2bQ8CFI7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Polr2bQ8CFI7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Gm42642-201ENSMUST00000200683 355 ntBASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Polr2bQ8CFI7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2bQ8CFI7 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Polr2bQ8CFI7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2bQ8CFI7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Polr2bQ8CFI7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.61■□□□□ 0.89
Polr2bQ8CFI7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms