Protein–RNA interactions for Protein: Q8CBD1

Nrip1, Nuclear receptor-interacting protein 1, mousemouse

Predictions only

Length 1,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nrip1Q8CBD1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrip1Q8CBD1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrip1Q8CBD1 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Nrip1Q8CBD1 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.27■□□□□ 0.84
Nrip1Q8CBD1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.27■□□□□ 0.84
Nrip1Q8CBD1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Nrip1Q8CBD1 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nrip1Q8CBD1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nrip1Q8CBD1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Gm7977-201ENSMUST00000193787 748 ntBASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Nrip1Q8CBD1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Nrip1Q8CBD1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Gm27275-201ENSMUST00000184318 272 ntBASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.22■□□□□ 0.83
Nrip1Q8CBD1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nrip1Q8CBD1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Nrip1Q8CBD1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nrip1Q8CBD1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Nrip1Q8CBD1 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms