Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf2tQ8C7E9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.72■□□□□ 0.75
Cstf2tQ8C7E9 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cstf2tQ8C7E9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf2tQ8C7E9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cstf2tQ8C7E9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Cstf2tQ8C7E9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cstf2tQ8C7E9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Gm15565-201ENSMUST00000118890 427 ntBASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Gm10819-201ENSMUST00000099988 561 ntBASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cstf2tQ8C7E9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cstf2tQ8C7E9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cstf2tQ8C7E9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cstf2tQ8C7E9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cstf2tQ8C7E9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cstf2tQ8C7E9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Cstf2tQ8C7E9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.64■□□□□ 0.74
Cstf2tQ8C7E9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Cstf2tQ8C7E9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf2tQ8C7E9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Cstf2tQ8C7E9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf2tQ8C7E9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf2tQ8C7E9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cstf2tQ8C7E9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms