Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.32■□□□□ 0.52
Eri3Q8C460 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Eri3Q8C460 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Eri3Q8C460 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Eri3Q8C460 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Eri3Q8C460 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Eri3Q8C460 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Eri3Q8C460 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.31■□□□□ 0.52
Eri3Q8C460 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.31■□□□□ 0.52
Eri3Q8C460 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.31■□□□□ 0.52
Eri3Q8C460 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Gm43060-201ENSMUST00000200621 289 ntBASIC18.31■□□□□ 0.52
Eri3Q8C460 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Eri3Q8C460 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.3■□□□□ 0.52
Eri3Q8C460 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Eri3Q8C460 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Eri3Q8C460 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.3■□□□□ 0.52
Eri3Q8C460 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Eri3Q8C460 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Eri3Q8C460 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Eri3Q8C460 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Eri3Q8C460 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Eri3Q8C460 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Eri3Q8C460 Golph3-202ENSMUST00000226517 2359 ntBASIC18.29■□□□□ 0.52
Eri3Q8C460 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Eri3Q8C460 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Eri3Q8C460 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Eri3Q8C460 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Eri3Q8C460 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.29■□□□□ 0.52
Eri3Q8C460 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Eri3Q8C460 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Eri3Q8C460 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Eri3Q8C460 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.28■□□□□ 0.52
Eri3Q8C460 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Eri3Q8C460 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Eri3Q8C460 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Eri3Q8C460 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Eri3Q8C460 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Eri3Q8C460 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.27■□□□□ 0.51
Eri3Q8C460 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Eri3Q8C460 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Gm27801-201ENSMUST00000184174 223 ntBASIC18.26■□□□□ 0.51
Eri3Q8C460 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Eri3Q8C460 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Eri3Q8C460 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Eri3Q8C460 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Eri3Q8C460 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.25■□□□□ 0.51
Eri3Q8C460 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Eri3Q8C460 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Eri3Q8C460 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Eri3Q8C460 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Eri3Q8C460 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms