Protein–RNA interactions for Protein: Q8C3X2

Ccdc90b, Coiled-coil domain-containing protein 90B, mitochondrial, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc90bQ8C3X2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc90bQ8C3X2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc90bQ8C3X2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc90bQ8C3X2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Ccdc90bQ8C3X2 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc90bQ8C3X2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc90bQ8C3X2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc90bQ8C3X2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc90bQ8C3X2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc90bQ8C3X2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Gm13238-201ENSMUST00000117655 780 ntBASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc90bQ8C3X2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc90bQ8C3X2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc90bQ8C3X2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms