Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Usp44Q8C2S0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Usp44Q8C2S0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Usp44Q8C2S0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp44Q8C2S0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp44Q8C2S0 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.69■■□□□ 1.22
Usp44Q8C2S0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Usp44Q8C2S0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
Usp44Q8C2S0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Usp44Q8C2S0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Usp44Q8C2S0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Usp44Q8C2S0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp44Q8C2S0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.65■■□□□ 1.22
Usp44Q8C2S0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp44Q8C2S0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Usp44Q8C2S0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Usp44Q8C2S0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Usp44Q8C2S0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
Usp44Q8C2S0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Usp44Q8C2S0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.64■■□□□ 1.21
Usp44Q8C2S0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Usp44Q8C2S0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.64■■□□□ 1.21
Usp44Q8C2S0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Usp44Q8C2S0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Usp44Q8C2S0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Usp44Q8C2S0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.62■■□□□ 1.21
Usp44Q8C2S0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.61■■□□□ 1.21
Usp44Q8C2S0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp44Q8C2S0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Usp44Q8C2S0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Usp44Q8C2S0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Gm7860-201ENSMUST00000121190 879 ntBASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Usp44Q8C2S0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 99 ms