Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ska3Q8C263 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.1■□□□□ 0.49
Ska3Q8C263 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ska3Q8C263 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ska3Q8C263 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.1■□□□□ 0.49
Ska3Q8C263 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.1■□□□□ 0.49
Ska3Q8C263 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.1■□□□□ 0.49
Ska3Q8C263 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Ska3Q8C263 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.1■□□□□ 0.49
Ska3Q8C263 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ska3Q8C263 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.1■□□□□ 0.49
Ska3Q8C263 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ska3Q8C263 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ska3Q8C263 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Ska3Q8C263 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ska3Q8C263 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ska3Q8C263 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.09■□□□□ 0.49
Ska3Q8C263 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ska3Q8C263 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.09■□□□□ 0.49
Ska3Q8C263 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ska3Q8C263 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ska3Q8C263 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ska3Q8C263 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ska3Q8C263 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.08■□□□□ 0.49
Ska3Q8C263 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ska3Q8C263 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ska3Q8C263 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Ska3Q8C263 Gm15039-201ENSMUST00000118914 875 ntBASIC18.08■□□□□ 0.48
Ska3Q8C263 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.08■□□□□ 0.48
Ska3Q8C263 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ska3Q8C263 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ska3Q8C263 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ska3Q8C263 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Ska3Q8C263 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ska3Q8C263 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.07■□□□□ 0.48
Ska3Q8C263 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Gm27801-201ENSMUST00000184174 223 ntBASIC18.07■□□□□ 0.48
Ska3Q8C263 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Ska3Q8C263 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Ska3Q8C263 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
Ska3Q8C263 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Ska3Q8C263 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Ska3Q8C263 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Ska3Q8C263 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ska3Q8C263 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ska3Q8C263 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ska3Q8C263 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.05■□□□□ 0.48
Ska3Q8C263 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ska3Q8C263 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ska3Q8C263 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ska3Q8C263 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
Ska3Q8C263 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Ska3Q8C263 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.03■□□□□ 0.48
Ska3Q8C263 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ska3Q8C263 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.03■□□□□ 0.48
Ska3Q8C263 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ska3Q8C263 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ska3Q8C263 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ska3Q8C263 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ska3Q8C263 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ska3Q8C263 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ska3Q8C263 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms