Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.92■□□□□ 0.78
Trub1Q8C0D0 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Gm11421-201ENSMUST00000122124 294 ntBASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trub1Q8C0D0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trub1Q8C0D0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trub1Q8C0D0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trub1Q8C0D0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trub1Q8C0D0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Gm43017-201ENSMUST00000198296 752 ntBASIC19.87■□□□□ 0.77
Trub1Q8C0D0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trub1Q8C0D0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trub1Q8C0D0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trub1Q8C0D0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trub1Q8C0D0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Gm26833-201ENSMUST00000180899 440 ntBASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trub1Q8C0D0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.83■□□□□ 0.76
Trub1Q8C0D0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms