Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpne3Q8BT60 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpne3Q8BT60 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.56■□□□□ 0.56
Cpne3Q8BT60 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Gm12922-201ENSMUST00000120626 809 ntBASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpne3Q8BT60 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpne3Q8BT60 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpne3Q8BT60 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpne3Q8BT60 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpne3Q8BT60 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpne3Q8BT60 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cpne3Q8BT60 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cpne3Q8BT60 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cpne3Q8BT60 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cpne3Q8BT60 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.49■□□□□ 0.55
Cpne3Q8BT60 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms