Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cpsf4Q8BQZ5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Spcs1-204ENSMUST00000226782 949 ntBASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Cpsf4Q8BQZ5 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Cpsf4Q8BQZ5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cpsf4Q8BQZ5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cpsf4Q8BQZ5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cpsf4Q8BQZ5 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.62■□□□□ 0.57
Cpsf4Q8BQZ5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cpsf4Q8BQZ5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cpsf4Q8BQZ5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf4Q8BQZ5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms