Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Srrm4Q8BKA3 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Srrm4Q8BKA3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Gm11421-201ENSMUST00000122124 294 ntBASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Srrm4Q8BKA3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srrm4Q8BKA3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srrm4Q8BKA3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srrm4Q8BKA3 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srrm4Q8BKA3 AA386476-201ENSMUST00000098781 1665 ntBASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srrm4Q8BKA3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Srrm4Q8BKA3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms